Digitize Me, Visualize Me, Search Me: Difference between revisions
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{{#widget:Vimeo|id=12873908}} | {{#widget:Vimeo|id=12873908}} | ||
[http://www.psfk.com/2010/09/biocurious-a-community-lab-for-biotechnology.html BioCurious: A Community Lab for Biotechnology] | ; [http://www.psfk.com/2010/09/biocurious-a-community-lab-for-biotechnology.html BioCurious: A Community Lab for Biotechnology] | ||
; Richard Stallman : [http://www.plosmedicine.org/article/info%3Adoi%2F10.1371%2Fjournal.pmed.0020047 Free Community Science and the Free Development of Science] | ; Richard Stallman : [http://www.plosmedicine.org/article/info%3Adoi%2F10.1371%2Fjournal.pmed.0020047 Free Community Science and the Free Development of Science] | ||
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=== 'This Revolution Will Be Digitized’: Online Tools for Open Science === | === 'This Revolution Will Be Digitized’: Online Tools for Open Science === | ||
[http://biogang.openwetware.org/ Biogang] | ; [http://biogang.openwetware.org/ Biogang] | ||
; Bill Hooker : [http://3quarksdaily.blogs.com/3quarksdaily/2007/01/the_future_of_s.html The Future of Science is Open, Part 3: An Open Science World] | ; Bill Hooker : [http://3quarksdaily.blogs.com/3quarksdaily/2007/01/the_future_of_s.html The Future of Science is Open, Part 3: An Open Science World] | ||
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=== Access to Knowledge === | === Access to Knowledge === | ||
[http://okfn.org/ Open Knowledge Foundation] | ; [http://okfn.org/ Open Knowledge Foundation] | ||
; Gaelle Krikorian and Amy Kapczynski, eds : [http://www.soros.org/initiatives/information/focus/access/articles_publications/publications/age-of-intellectual-property-20101110/age-of-intellectual-property-20101110.pdf ''Access to Knowledge In the Age of Intellectual Property''] | ; Gaelle Krikorian and Amy Kapczynski, eds : [http://www.soros.org/initiatives/information/focus/access/articles_publications/publications/age-of-intellectual-property-20101110/age-of-intellectual-property-20101110.pdf ''Access to Knowledge In the Age of Intellectual Property''] | ||
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=== World of Data === | === World of Data === | ||
[http://www.freeourdata.org.uk/ Free Our Data] | ; [http://www.freeourdata.org.uk/ Free Our Data] | ||
; Simon Rogers : [http://www.guardian.co.uk/news/datablog/2010/nov/09/canada-open-data How Canada Became an Open Data and Data Journalism Powerhouse] | ; Simon Rogers : [http://www.guardian.co.uk/news/datablog/2010/nov/09/canada-open-data How Canada Became an Open Data and Data Journalism Powerhouse] | ||
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=== Encode Me/Decode Me === | === Encode Me/Decode Me === | ||
[http://www.ornl.gov/sci/techresources/Human_Genome/home.shtml Human Genome Project] | ; [http://www.ornl.gov/sci/techresources/Human_Genome/home.shtml Human Genome Project] | ||
; The ENCODE Project Consortium : [http://pubmedcentralcanada.ca/picrender.cgi?accid=PMC3079585&blobtype=pdf&tool=pmcentrez A User's Guide to the Encyclopaedia of DNA Elements (ENCODE) ] | ; The ENCODE Project Consortium : [http://pubmedcentralcanada.ca/picrender.cgi?accid=PMC3079585&blobtype=pdf&tool=pmcentrez A User's Guide to the Encyclopaedia of DNA Elements (ENCODE) ] | ||
[http://www.decodeme.com/about-decodeme deCODEme] | ; [http://www.decodeme.com/about-decodeme deCODEme] | ||
=== Life-Tracking === | === Life-Tracking === | ||
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{{#widget:Vimeo|id=27381297}} | {{#widget:Vimeo|id=27381297}} | ||
[http://quantifiedself.com Quantified Self] | ; [http://quantifiedself.com Quantified Self] | ||
; Gary Wolf : [http://xrl.us/bh3d4g The Data-Driven Life] | ; Gary Wolf : [http://xrl.us/bh3d4g The Data-Driven Life] | ||
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; Nathan Yau : [http://flowingdata.com/2011/02/23/data-visualization-meets-game-design-to-explore-your-digital-life/ Data Visualization Meets Game Design to Explore your Digital Life] | ; Nathan Yau : [http://flowingdata.com/2011/02/23/data-visualization-meets-game-design-to-explore-your-digital-life/ Data Visualization Meets Game Design to Explore your Digital Life] | ||
[http://bloom.io/ Bloom] | ; [http://bloom.io/ Bloom] | ||
=== Mood-mapping === | === Mood-mapping === | ||
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; Celeste Biever : [http://www.newscientist.com/article/dn19200-twitter-mood-maps-reveal-emotional-states-of-america.html Twitter Mood Maps Reveal Emotional States of America] | ; Celeste Biever : [http://www.newscientist.com/article/dn19200-twitter-mood-maps-reveal-emotional-states-of-america.html Twitter Mood Maps Reveal Emotional States of America] | ||
[http://www.newscientist.com/articlevideo/dn19200/221111468001-twitter-mood-maps-reveal-emotional-states-of-america.html Twitter mood video] | ; [http://www.newscientist.com/articlevideo/dn19200/221111468001-twitter-mood-maps-reveal-emotional-states-of-america.html Twitter mood video] | ||
<youtube>ZglPWYb8X2o</youtube> [http://www.moodscope.com/] | <youtube>ZglPWYb8X2o</youtube> [http://www.moodscope.com/] | ||
[http://www.moodscope.com/ Moodscope] | ; [http://www.moodscope.com/ Moodscope] | ||
[http://www.mappiness.org.uk Mappiness] | ; [http://www.mappiness.org.uk Mappiness] | ||
=== The Visualized Human (or, The Human As Spectacle) === | === The Visualized Human (or, The Human As Spectacle) === | ||
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{{#widget:Vimeo|id=8223187}} [http://www.suicidemachine.org/] | {{#widget:Vimeo|id=8223187}} [http://www.suicidemachine.org/] | ||
[http://www.suicidemachine.org/ Web 2.0 Suicide Machine] | ; [http://www.suicidemachine.org/ Web 2.0 Suicide Machine] | ||
[http://www.freedomboxfoundation.org/ Freedom Box Foundation] | ; [http://www.freedomboxfoundation.org/ Freedom Box Foundation] | ||
[http://navasse.net/traceblog/about.html Traceblog] | ; [http://navasse.net/traceblog/about.html Traceblog] | ||
[http://turbulence.org/Works/JJPS/extension The JJPS Firefox Extension] | ; [http://turbulence.org/Works/JJPS/extension The JJPS Firefox Extension] | ||
== Appendix == | == Appendix == |
Revision as of 15:41, 30 September 2011
Open Science and its Discontents
edited by Gary Hall
Introduction: White Noise: On the Limits of Openness (Living Book Mix)
One of the aims of the Living Books About Life series is to provide a 'bridge' or point of connection, translation, even interrogation and contestation, between the humanities and the sciences. Accordingly, this introduction to Digitize Me, Visualize Me, Search Me, a book in the series on open science, takes as its starting point the so-called ‘computational turn’ to data-intensive scholarship in the humanities.
The phrase ‘the computational turn’ has been adopted to refer to the process whereby techniques and methodologies drawn from computer science and related fields – including science visualization, interactive information visualization, image processing, network analysis, statistical data analysis, and the management, manipulation and mining of data – are being increasingly used to produce new ways of approaching and understanding texts in the humanities - what is sometimes thought of as 'the digital humanities'. (more...)
Open Science
It’s An Open (Science), Open (Access), Open (Source), Open (Notebook) World
- Patrick O. Brown, Michael B. Eisen, Harold Varmus
- Why PLoS Became a Publisher
- Sally Murray, Stephen Choi, John Hoey, Claire Kendall, James Maskalyk, and Anita Palepu
- Open Science, Open Access and Open Source Software at Open Medicine
Community Science
- Richard Stallman
- Free Community Science and the Free Development of Science
'This Revolution Will Be Digitized’: Online Tools for Open Science
- Chris Patil and Vivian Siegel
- This Revolution Will Be Digitized: Online Tools for Radical Collaboration
Open Science Publishing
- Philip E. Bourne
- What Do I Want from the Publisher of the Future?
Open Knowledge
Access to Knowledge
- Gaelle Krikorian and Amy Kapczynski, eds
- Access to Knowledge In the Age of Intellectual Property
New Models for Open Sharing and Open Research
- Anne H. Margulies
- A New Model for Open Sharing
- Thomas B. Kepler, Marc A. Marti-Renom, Stephen M. Maurer, Arti K. Rai, Ginger Taylor, Matthew H. Todd
- Open Source Research - The Power of Us
Open Knowledge and its Discontents
- Michael Gurstein
- Are the Open Data Warriors Fighting for Robin Hood or the Sheriff?: Some Reflections on OKCon 2011 and the Emerging Data Divide
Open Data
Data-Intensive Science
- Vincent S. Smith
- Data Publication: Towards a Database of Everything
- Tony Hey, Stewart Tansley, Kristen Tolle, eds
- Scholarly Communication, The Fourth Paradigm: Data-Intensive Scientific Discovery
World of Data
We Can Know It For You
- Daniel Chandramohan, Kenji Shibuya, Philip Setel, Sandy Cairncross, Alan D. Lopez, Christopher J. L. Murray, Basia Żaba, Robert W. Snow, Fred Binka
- Should Data from Demographic Surveillance Systems Be Made More Widely Available to Researchers?
Digitize Me
Encode Me/Decode Me
- The ENCODE Project Consortium
- A User's Guide to the Encyclopaedia of DNA Elements (ENCODE)
Life-Tracking
- Gary Wolf
- The Data-Driven Life
- Aiden R. Doherty and Alan F. Smeaton
- Automatically Augmenting Lifelog Events Using Pervasively Generated Content from Millions of People
- Jennifer S. Beaudin, Stephen S. Intille, and Margaret E. Morris
- To Track or Not to Track: User Reactions to Concepts in Longitudinal Health Monitoring
The Neurological Turn: or, ‘How the Internet Gets Inside Us'
- Adam Gopnik
- The Information: How the Internet Gets Inside Us
- N. Katherine Hayles
- Hyper and Deep Attention: The Generation Divide in Cognitive Modes
Visualize Me
What is Visualization?
- Lev Manovich
- What is Visualization?
Mood-mapping
- Celeste Biever
- Twitter Mood Maps Reveal Emotional States of America
The Visualized Human (or, The Human As Spectacle)
- Nicholas Felton
- The Annual Felton Report
- Deb Roy
- The Birth of a Word
Search Me
Search-Engine Science
- Emily H. Chan, Vikram Sahai, Corrie Conrad, and John S. Brownstein
- Using Web Search Query Data to Monitor Dengue Epidemics: A New Model for Neglected Tropical Disease Surveillance
- Annie Y.S. Lau, Enrico Coiera, Tatjana Zrimec, and Paul Compton
- Clinician Search Behaviors May Be Influenced by Search Engine Design
The Science of Control
- Alession Signorini Alberto Maria Segre, Philip M. Polgreen
- The Use of Twitter to Track Levels of Disease Activity and Public Concern in the U.S. During the Influenza A H1N1 Pandemic
- David Parry
- Surveillance
- Felix Stalder and Christine Mayer
- The Second Index: Search Engines, Personalization and Surveillance (Deep Search)
Deep Search
- Michael K. Bergman
- The Deep Web: Surfacing Hidden Value
- Clare Birchall
- The Invisible Web, The In/Visible
Media Gifts?
Appendix
- Karl Popper, The Open Society and its Enemies