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Ecologies, Assemblages and Evolution
Ecologies, Assemblages and Evolution


''edited by'' Janneke Adema and Pete Woodbridge
[http://www.livingbooksaboutlife.org/books/ISBN_Numbers ISBN: 978-1-60785-271-1]
 
''edited by'' [http://www.livingbooksaboutlife.org/books/Symbiosis/bio Janneke Adema and Pete Woodbridge]
__TOC__
__TOC__
== Introduction  ==
== [http://www.livingbooksaboutlife.org/books/Symbiosis/Introduction Introduction: Symbiosis as a Living Evolving Critique] ==
 
 
<youtube>FPGH7pk5RlQ</youtube>


    [[Image:Cladonia macilenta.jpg|182x200px|Cladonia macilenta]] [[Image:Amphiprion percula.JPG|265x200px|Amphiprion percula.JPG]] [[Image:PloverCrocodileSymbiosis.jpg|182x200px]]
Different species, interacting in a symbiotic fashion, living together over a prolonged period of time, eventually co-evolving into new species: this vision of the biological phenomenon of symbiosis has created a strong impression—both of symbiosis as a metaphor and a material reality—of species in an intimate relationship together, cooperating in spite of differences, of becoming something else and transgressing boundaries. This idea has turned the concept of symbiosis, in its many guises and definitions, into a breeding ground for a posthuman, biologically and ecologically informed critique. Less focused on the biological process of symbiosis as such, our focus in Symbiosis: Ecologies, Assemblages and Evolution is more on how symbiosis can be used as a means to argue for an alternative worldview and even a better world.... ([http://www.livingbooksaboutlife.org/books/Symbiosis/Introduction more])


== Symbiosis and Evolution  ==
== Symbiosis and Evolution  ==
{{#widget:Vimeo|id=7461457}}  
{{#widget:Vimeo|id=7461457}}  


Watson, R. A. and Pollack, J. B.  
; Watson, R. A. and Pollack, J. B. : [http://eprints.ecs.soton.ac.uk/12009/ How Symbiosis Can Guide Evolution]  
 
; Fabio Lucian and Samuel Alizon : [http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1000565 The Evolutionary Dynamics of a Rapidly Mutating Virus within and between Hosts: The Case of Hepatitis C Virus ]  
[http://eprints.ecs.soton.ac.uk/12009/ How Symbiosis Can Guide Evolution]  
; Wired Science : [http://www.wired.com/wiredscience/2010/01/green-sea-slug/ Green Sea Slug Is Part Animal, Part Plant]  
 
Fabio Lucian and Samuel Alizon  
 
[http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1000565 The Evolutionary Dynamics of a Rapidly Mutating Virus within and between Hosts: The Case of Hepatitis C Virus ]  
 
Wired Science
 
[http://www.wired.com/wiredscience/2010/01/green-sea-slug/ Green Sea Slug Is Part Animal, Part Plant]  


=== Endosymbiosis  ===
=== Endosymbiosis  ===


[[Image:Endosymbiosis.PNG|200x220px|Endosymbiosis.PNG]]
[[Image:Endosymbiosis.png]]  
 
Jian Xu, Michael A. Mahowald, Ruth E. Ley et.al.
 
[http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.0050156 Evolution of Symbiotic Bacteria in the Distal Human Intestine]  


Jennifer J. Wernegreen
; Jian Xu, Michael A. Mahowald, Ruth E. Ley et.al. : [http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.0050156 Evolution of Symbiotic Bacteria in the Distal Human Intestine]


[http://journal.pbio.0020068.PDF Endosymbiosis: Lessons in Conflict Resolution]
; Jennifer J. Wernegreen : [http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.0020068 Endosymbiosis: Lessons in Conflict Resolution]


=== Symbiogenetics ===
=== Symbiogenetics ===
 
; Lynn Margulis : [http://books.google.com/books?id=3sKzeiHUIUQC&lpg=PP1&dq=inauthor%3A%22Lynn%20Margulis%22&pg=PA1#v=onepage&q&f=false Symbiogenesis and Symbionticism]
Lynn Margulis  
; Ivan Emmanuel Wallin : [http://www.archive.org/download/symbionticismori00wall/symbionticismori00wall.pdf Symbionticism and the origin of species (1927)]
 
[http://books.google.com/books?id=3sKzeiHUIUQC&lpg=PP1&dq=inauthor%3A%22Lynn%20Margulis%22&pg=PA1#v=onepage&q&f=false Symbiogenesis and Symbionticism]
 
Ivan Emmanuel Wallin  
 
[http://www.archive.org/download/symbionticismori00wall/symbionticismori00wall.pdf Symbionticism and the origin of species (1927)]
 


== Symbiosis and Ecology  ==
== Symbiosis and Ecology  ==
=== Community Ecology ===
=== Community Ecology ===
; Jos C. Mieog, Jeanine L. Olsen, Ray Berkelmans et.al. : [http://www.plosone.org/article/info:doi%2F10.1371%2Fjournal.pone.0006364 The Roles and Interactions of Symbiont, Host and Environment in Defining Coral Fitness]


Jos C. Mieog, Jeanine L. Olsen, Ray Berkelmans et.al.
<youtube>hbveXyfIllY</youtube> <youtube>LBR4pEC7kwU</youtube>
 
[http://journal.pone.0006364.PDF The Roles and Interactions of Symbiont, Host and Environment in Defining Coral Fitness]
 
<youtube>hbveXyfIllY</youtube> <youtube>LBR4pEC7kwU</youtube>  


=== Biodiversity and complexity  ===
=== Biodiversity and complexity  ===
 
; Christina Toft, Tom A. Williams, and Mario A. Fares : [http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1000344 Genome-Wide Functional Divergence after the Symbiosis of Proteobacteria with Insects Unraveled through a Novel Computational Approach]
Christina Toft, Tom A. Williams, and Mario A. Fares  
 
[http://PMC2659769.PDF Genome-Wide Functional Divergence after the Symbiosis of Proteobacteria with Insects Unraveled through a Novel Computational Approach]  


=== Interdependence ===
=== Interdependence ===
 
; Timothy Morton Thinking Ecology<nowiki>:</nowiki> The Mesh Part 1: <youtube>R-mWCPa9y3c</youtube>
Timothy Morton
; Timothy Morton – : [http://www.youtube.com/watch?v=viiA5s8DV7I Thinking Ecology: The Mesh Part 2]
 
; Timothy Morton –  : [http://www.youtube.com/watch?v=BNl6fOd26Q0 Thinking Ecology: The Mesh Part 3]
Thinking Ecology: The Mesh
 
<youtube>R-mWCPa9y3c</youtube>  
 
[http://www.youtube.com/watch?v=viiA5s8DV7I Thinking Ecology: The Mesha Part 2]
 
[http://www.youtube.com/watch?v=BNl6fOd26Q0 Thinking Ecology: The Mesha Part 3]


=== Life Systems and Gaia Hypothesis ===
=== Life Systems and Gaia Hypothesis ===
 
; Fritjof Capra : [http://www.mountainman.com.au/f_capra.html The Turning Point: Chapter on the Systems View of Life]  
Fritjof Capra  
; Stephen B. Scharper : [http://books.google.co.uk/books?id=-h4UqAHe4MMC&lpg=PA53&ots=vVwmgq055Q&dq=james%20lovelock%20gaia%20symbiosis&lr&pg=PA53#v=onepage&q=james%20lovelock%20gaia%20symbiosis&f=false The Gaia Hypothesis. The world as a living organism]
 
; Timothy Morton : [http://itunes.apple.com/gb/itunes-u/literature-environment-fall/id399641376 Lynn Margulis, Symbiosis, Ethics] Track 30 of Literature and the Environment
[http://www.mountainman.com.au/f_capra.html The Turning Point: Chapter on the Systems View of Life]  
; Lynn Margulis, Stephen Buhner and John Seed : Activism, Deep Ecology & the Gaian Era
 
<youtube>Zc99ikb3KXY</youtube>
James Lovelock/Lynn Margulis
 
[http://www.mountainman.com.au/gaia_lyn.html The Gaia Hypothesis]  
 
Timothy Morton
 
[http://itunes.apple.com/gb/itunes-u/literature-environment-fall/id399641376 Lynn Margulis, Symbiosis, Ethics] Track 30 of Literature and the Environment


=== Media Ecologies ===
=== Media Ecologies ===
 
; Matthew Fuller : [http://mitpress.mit.edu/books/chapters/026256226Xintro1.pdf Media Ecologies ]  
Matthew Fuller [http://mitpress.mit.edu/books/chapters/026256226Xintro1.pdf Media Ecologies ]  


== Symbiosis and Posthumanism ==
== Symbiosis and Posthumanism ==
=== Human/Machine Symbiosis ===
=== Human/Machine Symbiosis ===
; J.C.R. Licklider : [http://memex.org/licklider.pdf Man-Computer symbiosis]
; Gerwin Schalk : [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2722922/ Brain-Computer Symbiosis]


J.C.R. Licklider
<youtube>oLalkcMDCwg</youtube>
 
[http://memex.org/licklider.pdf Man-Computer symbiosis]
 
Gerwin Schalk
 
[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2722922/ Brain-Computer Symbiosis]
 
<youtube>V-NS6l_Fg-0</youtube> <youtube>oLalkcMDCwg</youtube>
 


=== Symbiotic Intelligence===
=== Symbiotic Intelligence===
 
; David E. Moriarty and Risto Miikkulainen : [http://nn.cs.utexas.edu/?moriarty:ec97 Forming Neural Networks Through Efficient and Adaptive Coevolution]
David E. Moriarty and Risto Miikkulainen
; Norman L. Johnson and S. Rasmussen: [http://collectivescience.com/deeper_overview.html Symbiotic Intelligence and the Internet: A Deeper Overview]
 
[http://www.mitpressjournals.org/doi/pdf/10.1162/evco.1997.5.4.373 Forming Neural Networks Through Efficient and Adaptive Coevolution]
 
Dr. Norman L. Johnson  
 
[http://collectivescience.com/deeper_overview.html Symbiotic Intelligence and the Internet: A Deeper Overview]


===Human-animal hybrids, chimeras and symbiosis ===
===Human-animal hybrids, chimeras and symbiosis ===
 
; Anant Bhan, Peter A Singer, and Abdallah S Daar : [http://biomedcentral.com/content/pdf/1472-698X-10-8.PDF Human-animal chimeras for vaccine development: an endangered species or opportunity for the developing world?]  
Anant Bhan, Peter A Singer, and Abdallah S Daar  
 
[http://biomedcentral.com/content/pdf/1472-698X-10-8.PDF Human-animal chimeras for vaccine development: an endangered species or opportunity for the developing world?]  


=== Machinic assemblages: Bugs, machines and viruses ===
=== Machinic assemblages: Bugs, machines and viruses ===
 
; Susan Schuppli : [http://www.cosmosandhistory.org/index.php/journal/article/download/103-222-1-PB.PDF Of Mice Moths and Men Machines]  
Susan Schuppli  
; Jussi Parikka : [http://four.fibreculturejournal.org/fcj-019-digital-monsters-binary-aliens-%E2%80%93-computer-viruses-capitalism-and-the-flow-of-information/ Digital Monsters, Binary Aliens – Computer Viruses, Capitalism and the Flow of Information]  
 
[http://www.cosmosandhistory.org/index.php/journal/article/download/103-222-1-PB.PDF Of Mice Moths and Men Machines]  
 
Jussi Parikka  
 
[http://four.fibreculturejournal.org/fcj-019-digital-monsters-binary-aliens-%E2%80%93-computer-viruses-capitalism-and-the-flow-of-information/ Digital Monsters, Binary Aliens – Computer Viruses, Capitalism and the Flow of Information]  


<youtube>XwpHhkXnWeA</youtube>  
<youtube>XwpHhkXnWeA</youtube>  
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== Symbiosis and Augmentation ==
== Symbiosis and Augmentation ==


Kevin Warwick
<youtube>VCYrW-G9Y6I</youtube>
; Justin C. Sanchez, Babak Mahmoudi, Jack DiGiovanna, Jose C. Principe : [http://www.bme.miami.edu/nrg/publications/journal/journal%2019.pdf Exploiting co-adaptation for the design of symbiotic neuroprosthetic assistants]
; Mitchell Whitelaw : [http://www.hostprods.net/text/symbiotic-circuits/ Andy Gracie: Symbiotic Circuits]
; Melinda Rackham : [http://www.culturemachine.net/index.php/cm/article/view/291/276 Carrier becoming symborg]
; Melinda Rackham and Damien Everett : [http://collection.eliterature.org/1/works/rackham_everett__carrier_becoming_symborg.html Carrier (becoming symborg)]
; Christian Bök : [http://www.law.ed.ac.uk/ahrc/script-ed/vol5-2/editorial.asp The Xenotext Experiment]


[http://www.sciencedirect.com/science/article/pii/S0031320311002032 Brain computer interface control via functional connectivity dynamics]
== [http://www.livingbooksaboutlife.org/books/Symbiosis/Attributions Attributions] ==
 
Justin C. Sanchez, Babak Mahmoudi, Jack DiGiovanna, Jose C. Principe
 
[http://www.bme.miami.edu/nrg/publications/journal/journal%2019.pdf Exploiting co-adaptation for the design of symbiotic neuroprosthetic assistants]
 
Mitchell Whitelaw


[http://pylon.tv/andy_gracie_symbiotic_circuits.htm Andy Gracie: Symbiotic Circuits]
== A 'Frozen' PDF Version of this Living Book ==
 
; [http://livingbooksaboutlife.org/pdfs/bookarchive/Symbiosis.pdf Download a 'frozen' PDF version of this book as it appeared on 7th October 2011]
Melinda Rackham
 
[http://www.culturemachine.net/index.php/cm/article/view/291/276 Carrier becoming symborg]
 
== [http://www.livingbooksaboutlife.org/books/Symbiosis/Attributions Attributions] ==

Latest revision as of 06:55, 21 June 2016

Symbiosis1.jpg
Symbiosis1.jpg

Ecologies, Assemblages and Evolution

ISBN: 978-1-60785-271-1

edited by Janneke Adema and Pete Woodbridge

Introduction: Symbiosis as a Living Evolving Critique

Different species, interacting in a symbiotic fashion, living together over a prolonged period of time, eventually co-evolving into new species: this vision of the biological phenomenon of symbiosis has created a strong impression—both of symbiosis as a metaphor and a material reality—of species in an intimate relationship together, cooperating in spite of differences, of becoming something else and transgressing boundaries. This idea has turned the concept of symbiosis, in its many guises and definitions, into a breeding ground for a posthuman, biologically and ecologically informed critique. Less focused on the biological process of symbiosis as such, our focus in Symbiosis: Ecologies, Assemblages and Evolution is more on how symbiosis can be used as a means to argue for an alternative worldview and even a better world.... (more)

Symbiosis and Evolution

Watson, R. A. and Pollack, J. B.
How Symbiosis Can Guide Evolution
Fabio Lucian and Samuel Alizon
The Evolutionary Dynamics of a Rapidly Mutating Virus within and between Hosts: The Case of Hepatitis C Virus
Wired Science
Green Sea Slug Is Part Animal, Part Plant

Endosymbiosis

Jian Xu, Michael A. Mahowald, Ruth E. Ley et.al.
Evolution of Symbiotic Bacteria in the Distal Human Intestine
Jennifer J. Wernegreen
Endosymbiosis: Lessons in Conflict Resolution

Symbiogenetics

Lynn Margulis
Symbiogenesis and Symbionticism
Ivan Emmanuel Wallin
Symbionticism and the origin of species (1927)

Symbiosis and Ecology

Community Ecology

Jos C. Mieog, Jeanine L. Olsen, Ray Berkelmans et.al.
The Roles and Interactions of Symbiont, Host and Environment in Defining Coral Fitness

Biodiversity and complexity

Christina Toft, Tom A. Williams, and Mario A. Fares
Genome-Wide Functional Divergence after the Symbiosis of Proteobacteria with Insects Unraveled through a Novel Computational Approach

Interdependence

Timothy Morton – Thinking Ecology: The Mesh Part 1
Timothy Morton –
Thinking Ecology: The Mesh Part 2
Timothy Morton –
Thinking Ecology: The Mesh Part 3

Life Systems and Gaia Hypothesis

Fritjof Capra
The Turning Point: Chapter on the Systems View of Life
Stephen B. Scharper
The Gaia Hypothesis. The world as a living organism
Timothy Morton
Lynn Margulis, Symbiosis, Ethics Track 30 of Literature and the Environment
Lynn Margulis, Stephen Buhner and John Seed
Activism, Deep Ecology & the Gaian Era

Media Ecologies

Matthew Fuller
Media Ecologies

Symbiosis and Posthumanism

Human/Machine Symbiosis

J.C.R. Licklider
Man-Computer symbiosis
Gerwin Schalk
Brain-Computer Symbiosis

Symbiotic Intelligence

David E. Moriarty and Risto Miikkulainen
Forming Neural Networks Through Efficient and Adaptive Coevolution
Norman L. Johnson and S. Rasmussen
Symbiotic Intelligence and the Internet: A Deeper Overview

Human-animal hybrids, chimeras and symbiosis

Anant Bhan, Peter A Singer, and Abdallah S Daar
Human-animal chimeras for vaccine development: an endangered species or opportunity for the developing world?

Machinic assemblages: Bugs, machines and viruses

Susan Schuppli
Of Mice Moths and Men Machines
Jussi Parikka
Digital Monsters, Binary Aliens – Computer Viruses, Capitalism and the Flow of Information

Symbiosis and Augmentation

Justin C. Sanchez, Babak Mahmoudi, Jack DiGiovanna, Jose C. Principe
Exploiting co-adaptation for the design of symbiotic neuroprosthetic assistants
Mitchell Whitelaw
Andy Gracie: Symbiotic Circuits
Melinda Rackham
Carrier becoming symborg
Melinda Rackham and Damien Everett
Carrier (becoming symborg)
Christian Bök
The Xenotext Experiment

Attributions

A 'Frozen' PDF Version of this Living Book

Download a 'frozen' PDF version of this book as it appeared on 7th October 2011